Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIERLVGNLRDLNPLDFNVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPHSEPNFKVSLASDFKVVVK
3TJ9 Chain:D ((1-154))
MIIERLVGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPHSE----------------
General information:
TITO was launched using:
RESULT:
Template:
3TJ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58928 for 1048 contacts (-56.2/contact) +
2D Compatibility (PS) -15953 + (NN) -3543 + (LL) 1192
1D Compatibility (HY) -22000 + (ID) 7600
Total energy: -106832.0 ( -101.94 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_3TJ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJ9-query.scw
PDB file :
Tito_Scwrl_3TJ9.pdb
: