Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASFSILSIFKIGVGPSSSHTIGPMEAGARFCGLLKGILEQVERV--QITLHGSLA-LTGKGHLSDEAVLIGLHGIYANELDITTK------KALLHEAFENKVLKLANQHHIPFDYAKDLIFDNKPLARHQNALILKAFNAKNEVLKEETYYS---VGGGFVYTEKELDNLSEEG---ENESVAYDFSSAKELLELCQKHQKSIAEIVRLRENALK----NHPDATM----TKIYHAMLEC------------YHNGANSK-----------ERYLPGSLKV-------TRLAPSVKTRLEKHPTSGKDPLALIDYISLYARSIAEENASGGKVVTAP----TNGACAVVPSVLSYAKN------HLF-ENLSQKSINDFLLTSAAIGYLYKK-NASLSGAEAGCQAEIGVASSMAAG-GLAHLCQATTQQVLIASEIAMEHHLGLTCDPVGGLVQIPCIERNVLGAIKAISASKLALEDEYKPKVSLDEVIATMYATGKD-MNEKYKETSLGGLAKTLKC |
| 4PQG Chain:A ((6-511)) | HHHMTIYNIN-LGIGWASS---GVEYAQAYRAGVFRKLNLSSKFIFTDMILADNIQHLTANIGFDDNQVIW----LYNHFTDIKIAPTSVTVDDVLAYFGGEESHREKNGKVLRVFFFDQDKFVTCYLVDENKDLVQHAEYVFKGNLIRKDYFSYTRYCSEYFAPKDNVAVLYQRTFYNEDGTPVYDILMNQGKEEVYHFKDKIFYGKQAFVRAFMKSLNLNKSDLVILDRETGIGQVVFEEAQTAHLAVVVHAEHYSENATNEDYILWNNYYDYQFTNADKVDFFIVSTDRQNEVLQEQFAKY-TQHQPKIVTIPVGSIDSLTDSSQGRKPFSLITASRLAKEKHIDWLVKAVIEAHKELPELTFDIYGSGGEDSLLREIIANHQAEDYIQLKGHAELS--QIYSQYEVYLTASTSEGFGLTLMEAIGSGLPLIGFDVPYGNQTFIEDGQNG--YLIPSSSDHVEDQIKQAYAAKICQLYQENR---LEAMRAYSYQIAEGFLTKEILEKWKKTVEEVLHD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122541 for 3196 contacts (-38.3/contact) +
2D Compatibility (PS) -45315 + (NN) 911 + (LL) 304
1D Compatibility (HY) -14400 + (ID) 4000
Total energy: -185041.0 ( -57.90 by residue)
QMean score : 0.228
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