Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEG--NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDYGLEELEEVGDK-IIIRGDYNSFKLLNEGFESLRLPIIKAGLQRIATTPIEL-NDEQMELTEKLLDRIEDDDDVVALYTNIE-------- |
| 1LFP Chain:A ((5-247)) | --SHWAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKGAGELEGEQFEEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTKH-GGNLGASGCVSYLFERKGYIEVPAKE-----VSEEELLEKAIEVGAEDVQPGE-EVHIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQINDEETAQKVIKLLNALEELDDVQQVIANFEIPEEILQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 64228 for 1755 contacts (36.6/contact) +
2D Compatibility (PS) -24833 + (NN) -8616 + (LL) 536
1D Compatibility (HY) 9600 + (ID) 2050
Total energy: 38865.0 ( 22.15 by residue)
QMean score : 0.175
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