Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MSLKFFRKNIVLKVV-------PRLAFGV-----LWLLHKTCKNRYFLAQDLKEKPFIVSCWH-GELG----MIGFAYLRLQKPSV---YVIASQHFD----------GSIAAGL-----------FESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVAITPDGP----KGPRHS--------IADGV----------IALAQKSGVGISACRVVC-KNAWR------LNTWDQFEIPKPFSEVRYYMLESVIIPKEWELSKAKEYLKTRMDSVGFEESQRGLGA |
| 4L5C Chain:A ((24-312)) | KVKVGIIGGSGFDDPNLFKKVGVRQVTTPFGKPSDTLVEGFVGDVACVVLPRHGKGHLIPPSEVN---YRANVWALKDLGCTHILATNACGSLQEDLVPGDFVVLNQFMDKTWGRENTFYGSKPDSLKGVLHMPMAEPFCERTRQILIQAARNKSINVYDKKTMDKSACIHPCVHAEGSAVTINGPRFSTRCESFIHKAMGLDIVNMTLVPEVSLAREAGLSYASIAIVTDFDCWKSEEEHVCVDMVLEQFRKSVVHVREILLEAVALIGAEDWTKTIEANKALVMS-----SRQDL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73972 for 1333 contacts (-55.5/contact) +
2D Compatibility (PS) -21844 + (NN) 345 + (LL) 360
1D Compatibility (HY) -10800 + (ID) 2350
Total energy: -108261.0 ( -81.22 by residue)
QMean score : 0.273
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