Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISNISIHPKTMFKNALNIQDFSFKNHTSTAIIGTNGAGKSTLINTILGIRSDYNFKAQNNNIPYHDNV----IPQRKQLGVVSNLFNYPPGLNANDLFKFYQFFHK-----------NCTLDLFEKNLLNKTYEHLSDGQKQRLKIDLALSHHPQLVIMDEPETSLEQNALIRLSNLISLRN-TQQLTSIIATHDPIV-LDSCEWVLLLKNGNIAQYKPLNSILKSVAKTFNFKEKPTTKDLLALLKDI |
3TUI Chain:C ((41-254)) | -------------IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75801 for 1542 contacts (-49.2/contact) +
2D Compatibility (PS) -21100 + (NN) -9848 + (LL) 1044
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -115805.0 ( -75.10 by residue)
QMean score : 0.369
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