Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVTFQVPSITCNHCVDKIEKFVGEIEGVSFIDASVEKKSVVVEFDTPATQD-LIKEALLDAGQEVV
2L3M Chain:A ((6-71))
-QLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDVQ
General information:
TITO was launched using:
RESULT:
Template:
2L3M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59647 for 451 contacts (-132.3/contact) +
2D Compatibility (PS) -7017 + (NN) -3192 + (LL) 208
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -75848.0 ( -168.18 by residue)
QMean score : 0.743
(partial model without unconserved sides chains):
PDB file :
Tito_2L3M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L3M-query.scw
PDB file :
Tito_Scwrl_2L3M.pdb
: