Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELGFNEAERQKILDSNSSLIRNANE----VRDKFIQNYAISLKDSNDPQDFLRRVQELRINMQKNFISFDTYYNYLNNLVLASYNRCKQEKTFAESTIKNELTLGEFVAEISDNFNNFMCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQILGIDDFGRKLNEIVQDIGTKYIILSKNKTYLTSLERAKLITQLKLNLE |
2LSE Chain:A ((1-101)) | -----MQEERKKLLEKLEKILDEVTDGAPDEARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYKDAPN--AVMEQLLEEIEKLLKKAGSLVPRGSYLEHHHHHH----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1488 for 622 contacts (2.4/contact) +
2D Compatibility (PS) -10312 + (NN) -4264 + (LL) 7636
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -7352.0 ( -11.82 by residue)
QMean score : 0.280
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