Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGLFVAPVLAILGAISADEMEKKRDDAKAYYSQVEVAVKKADVVID---NLQAVKK------MADLFTRQITKFDALF----------FLLSQDAIATMKKHHYDTSRYNQK--------------------EKDQLCVTVSTLFSLSAFLKAP-IMDKHQKLNKKAQKALNLMRDQMDSLENGNYSLDGIRFRQAQLKDLRDDKTS--------------------------- |
| 1A0I Chain:? ((1-239)) | -VNIKTNPFKAVSF--VESAIKKALDNAGYLIAEIKYDGVRGNICVDNTANSYWLSRVSKTIPALEHLNGFDVRWKRLLNDDRCFYKDGFMLDGELMVKGVDFNTGSGLLRTKWTDTKNQEFHRKKDKVPFKLHTGHLHIKLYAILPLHIVESGEDCDVMTLLMQEHVKNMLPLLQEYFPEIEWQAAESYEV-YDMVELQQLYEQKRAEGHEGLIVKDPMCIYKRGKKSGWWKMK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47877 for 1111 contacts (-43.1/contact) +
2D Compatibility (PS) -17400 + (NN) 242 + (LL) 656
1D Compatibility (HY) -9200 + (ID) 950
Total energy: -74529.0 ( -67.08 by residue)
QMean score : 0.241
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