Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIHIGVLSASDRASKGVYEDLSGKAIQEVLSEYLLNPLEFHYEIVADERDLIEKSLIKMCDEYQCDLVVTTGGTGPALRDITPEATKKVCQKMLPGFGELMRMTSLKYVPTAILSRQSAGIRNKSLIINLPGKPKSIRECLEAVFPAIPYCVDLILGNYMQVNEKNIQAFRPKQ
4TWG Chain:A ((9-155))
-------IIIASTRAASGVYTDECGPIIAEWLEQRGFSPLE--SKVVADGNPVGEA--LQDAVEAQVDLIITSGGTGISPTDSTPEQTVAVLDFVIPGLADAIRRAGLPKVPTSVLSRGVCGVAGQTLIVNLPGSPGGVRDGLDVLADVVHHALDQIA------------------
General information:
TITO was launched using:
RESULT:
Template:
4TWG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79462 for 1225 contacts (-64.9/contact) +
2D Compatibility (PS) -15108 + (NN) 199 + (LL) 2096
1D Compatibility (HY) -7600 + (ID) 2800
Total energy: -102675.0 ( -83.82 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_4TWG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TWG-query.scw
PDB file :
Tito_Scwrl_4TWG.pdb
: