Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVE-MQEEGVREAIAKLDNTDFMGRTIRVTEANPKKS
4ED5 Chain:A ((4-81))
--NLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSE
General information:
TITO was launched using:
RESULT:
Template:
4ED5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48645 for 513 contacts (-94.8/contact) +
2D Compatibility (PS) -8673 + (NN) -5563 + (LL) 272
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -69059.0 ( -134.62 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_4ED5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ED5-query.scw
PDB file :
Tito_Scwrl_4ED5.pdb
: