Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVESVIFDKGKPMLRMGEMILPIDSAIEFYKPDQKPLDQKLSDQKPQKLSEQKALEQKISEQKPQEPLDQKLSDQKPQKPLEQKISEQKPLDQKLSDQKPQKPLEQKISEQKPLDQKPQTPPKETA |
2P9R Chain:A ((140-188)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------PLVYIQDPKGNRIAQWQSF--QLEGGLKQFSFPL----SSEPFQGSYKVVVQKKS--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6808 for 224 contacts (-30.4/contact) +
2D Compatibility (PS) -4929 + (NN) 608 + (LL) 19344
1D Compatibility (HY) -800 + (ID) 350
Total energy: 7065.0 ( 31.54 by residue)
QMean score : 0.552
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