Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRLTAKEAEKLLLQNGFVFSRQKGSHRIYVKDKIRQVLPFHSGEILHPKIVKEIMENTLK
1PIN Chain:A ((6-39))
------------KLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGGKNGQGEPARVRCSH
General information:
TITO was launched using:
RESULT:
Template:
1PIN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1244 for 167 contacts (-7.4/contact) +
2D Compatibility (PS) -3623 + (NN) -603 + (LL) 1196
1D Compatibility (HY) -400 + (ID) 300
Total energy: -4974.0 ( -29.78 by residue)
QMean score : 0.212
(partial model without unconserved sides chains):
PDB file :
Tito_1PIN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PIN-query.scw
PDB file :
Tito_Scwrl_1PIN.pdb
: