Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSLSYVSKKFLSVLLLISLFLSACKSNNKDKLDENLLSSGTQSSKELNDKRDNIDKKSYAG-----LEDVFLDNKSIS-PNDKYMLLVFGRNGCSYCERLKKDLKNVKELRNYIKEHFSAYYVNISY-----SKEHNFKVGDKDKNDEKEIKMS-TEELAQIYAVQSTPTIVLSDKTGKTIYELPGYMPSVQFLAVLEFIGDGKYQDTKNDEDLTKKLKAYIKYKTNLSKSKSS |
2HYX Chain:A ((393-546)) | --------------------------------------------------QLESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQ--AYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISY-PIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLNDAKPGVKLPQPSSTTTPDLTPRAALTPETYFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30409 for 1073 contacts (-28.3/contact) +
2D Compatibility (PS) -15113 + (NN) -8451 + (LL) 3496
1D Compatibility (HY) 1200 + (ID) 900
Total energy: -50177.0 ( -46.76 by residue)
QMean score : 0.417
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