Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFLKKSLCALLISGFFIPPLMKAASFVYDLKFMSFNFNLASPPNNPYWNSLTKMQGRLMPQIGVQLDKRQALMFGAWFIQNLHTHYSYFPYSWGVTMYYQYIGKNLRFFL-GIVPRSYQIGHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRWWNGWFEGVVDWYGGRNWNNQPKKKNYDFDQFLYFVSSEFQFLKGYLGLGGQLVIFHNANSHSMGDNYPYGGNSYLKPGDATPQWPN-GYPYFSQKDNPQGGEIGKYSNPTILDR---VYYHAYLKADFKNLMPYMDNIFMTFGTQSSQTHYCVRYASECKNARFYNSFGGEFYAQAQYKGFGIFNRYYFSNKPQMHFYATYGQSLYTGL--PWYRAPNFDMIGLYYLYKNKWLSVRADAFFSFVGGGDGYHLYGKGGKWFVMYQQFLTLTIDTRELIDFVKSKIPK |
| 4ONQ Chain:A ((7-353)) | --RLPKPM-----IGFGVPTEPLPAMVRRTLP------SQAVGPPFFYYENVALAPKGVWDTISSSLYD----------IEPEFVDSKYFCAAARKRGYIHNLPVENRFPLFPLAPRTIHEAL-PLSK---KWW--------------PSWDPRTKLNCLQTAI----GSAQLTNRIRKAVEDFD--------------GEPPMRVQKFVLDQCRKW----NLVWVGRNKVAPLEPDEVEMLLGFP----KNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKDLFPGGINVLSLFS--------------------------GIGGGEVALYRLGI---------PLNTVVSVEKSEVNRDIVRSWWEQTNQRG---NLIHFNDVQQLNGDRLEQLIESFGGFDLVIGGS---------PSLFSSYVRILDLVKSIMS- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ONQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -86728 for 2536 contacts (-34.2/contact) +
2D Compatibility (PS) -33592 + (NN) -12884 + (LL) 9292
1D Compatibility (HY) -10000 + (ID) 3550
Total energy: -137462.0 ( -54.20 by residue)
QMean score : 0.186
|
|
|