Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENQTIPFKCPKCQEPINVSEALYKQIESENQSRFLAQQKAFEKEVNEKRAQYQSYFKNLEQKEEALKERAKEQQAQFDEAVKQASALALQDERAKIIEEARKNAFLEQQKGLELLQKELDEKSKQVQELHQKEAEIERLKRENNEAESRLKAENEKKLNEKLELEREKIEKALHEKNELKFKQQEEQLEMLRNELKNAQRKAELSSQQFQGEVQELAIEEFLRQKFPLDSV----EEIKKGQRGGDCIQVVHTREFQNCGKIYYESKRTKEF---QKAWVEKLKS---DMREIGADVGVIVSEA-LPKEMERMGLFEGVWVCSFEEFKGLSAVLREGVIQVSLAKKSQENKGDKVNLLYHYLTSSEFSMQVNAIIEGFEQLRADLESEKRAMARIWKSREKQIEKVFESTINMYGSIKGIAGNAIGQVKALELGYDEGDLEN |
| 1Y88 Chain:A ((16-123)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYFQGHMVARLLEEH-GFETKTNVIVQGNCVEQEIDVVAERD---G---ERYMIECKFHNIPVYTGLKEAMYTYARFLDVEKHGFTQPWIFTNTKFSEEAKKYAGCVGIKLTGWSYPEKEGIEVLLESKGLYPITILRIDKEVLDELVRAGLVFCRDVVSAGEEKLREIGLSAKKAREVIAEAKKVIGGS------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19041 for 657 contacts (-29.0/contact) +
2D Compatibility (PS) -10829 + (NN) -5106 + (LL) 23140
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -13936.0 ( -21.21 by residue)
QMean score : 0.465
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