Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTYNVAIVGASGAVGQELIKGLENSFFPIKKFVPLASARSAGKKIRAFNKDYEILETTHEVFEKEEIDIAFFSAGGSVSEEFAISASKTALVI-DNTSFFRLNKDVPLVVPEINAQEIFNAPLNIIANPNCSTIQMTQILNPLHLHFKIKSVIVSTYQAVSGAGNKGIESLKNELKTALEHLEKDPAIDLN-QVLQAGAFA--YPIAFNAIAHIDTFKENGYTKEELKMVHETHKIMGVD-FPISATCVRVPVLRSHSESLSIAFEKEFDLKEVYEVLKNAPSVVVCDDPSHNLYPTPLKASHTDSVFIGRLRKDLFDKKTLHGFCVADQLRVGAATNALKIALHYIKNA
3PYX Chain:B ((3-338))---YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEG--VDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHAL-DAHNGIIACPNCSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVK--PCDLHAEILPSGGDKKHYPIAFNALPQIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAAIAAFPGAVLEDDVAHQIYPQAINAVGSRDTFVGRIRKDLDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHERG


General information:
TITO was launched using:
RESULT:

Template: 3PYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168101 for 2911 contacts (-57.7/contact) +
2D Compatibility (PS) -34611 + (NN) -4968 + (LL) 448
1D Compatibility (HY) -26800 + (ID) 8200
Total energy: -242232.0 ( -83.21 by residue)
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_3PYX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PYX-query.scw
PDB file : Tito_Scwrl_3PYX.pdb: