Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDILNALYHQKDLNDEEVKKLFTLIIDEKVSPAQLGAVLCALKIKGESFKEISVAATTLLEHAPKPFNSGLDL---IDNCGTGGDGLKTINISTIAALIASSMGLSMAKHGSRSVSSHSGSADLLENLGVNIEMNPMQLENCFKQSHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGPLINPLRPKIQLLGVYDKSLCKTMALALKALGVKRAMVVNG-GGTDEIVLHDITHACELKNNEILEYDLSAKDFDLPPYDLKELQIENAKES----VQACLDILENKGKDSHTM-VVAANVASLLYLSHRAKDLKEGVSMTLEHLKTKAPYAHLQKIIRLSHA |
| 1GXB Chain:B ((3-319)) | INEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIK-----IDVPNAIDTAG---DGLGTVNVSTASAILLSLVN-PVAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRGIEEVKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFL------GKDEHVAEFIKINTAVALFALDRVGDFREGYEYA-DHLIEKSLDKLNEIISMNGDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GXB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204971 for 2679 contacts (-76.5/contact) +
2D Compatibility (PS) -32613 + (NN) -17799 + (LL) 164
1D Compatibility (HY) -24000 + (ID) 5850
Total energy: -285069.0 ( -106.41 by residue)
QMean score : 0.587
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