Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFSKLIGLFSHDIAIDLGTANTIVLVKGQ-GIIINEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRAIRPMKDGVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLTSVERNAVKES-ALSAGAREVFLIEEPMAAAIGAGLPVKEPQGSLIVDIGGGTTEIGVISLGGLV--ISKSIRVAGDKLDQSIVEYIRKKFNL----------------------------LIGERTGEEIKIEIGCAIKLDPP--------------------LTMEVSGRDQVSGLLHTIE---------------------------------LSSDDVFEAIKDQVREISSALRSVLEEVKPDLVRDIVQNGVVLTGGGALIKGLDKYLSDMVKL-------PVYV---GDEPLLAVAKGTGEAIQDLDLLSRVGFSE |
| 3QB0 Chain:A ((19-474)) | ------GGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADEG---NKKIFSEQSIG----IPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP-----NCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETR-YGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTK-----------NELIGLADLVYSSIMSSDVDLRATLAH-NVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172709 for 2503 contacts (-69.0/contact) +
2D Compatibility (PS) -33135 + (NN) -10149 + (LL) 2512
1D Compatibility (HY) 800 + (ID) 2400
Total energy: -215081.0 ( -85.93 by residue)
QMean score : 0.460
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