Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTRFKKAFISYSLGVLVVSLLLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIG-SYVEVPAMLNVWDRVVGVSD-YAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGN-PKAVEHAKKFGISFLSFQETTIAEAMQAMQAQATVLEID--ASKKFAKMQETLDFIAERLKGVKKKKGVEL-FH-KANKISGHQAISSDILEKGGIDNFGLKYV-KFGRADISVEKIVKENPEIIFIWWVSP-------LTPEDVLNNPKFSTIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEIEPFLWH |
| 3TNY Chain:A ((17-292)) | -------------------------------EVVTVEHAMGKTEVPANPKRVVILTNEGTEALLELGV--KPVGAVKSWTGDP-WYP-HI-KDKMKDVKVVGD--EGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIA-PTVFSE-TLRGEWKDNFKFYAKALNKEKEGQKVVADYESRMKDLKGKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKDDFAERNVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVIAANLLLDDIEKRFV------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110273 for 2157 contacts (-51.1/contact) +
2D Compatibility (PS) -27858 + (NN) -10280 + (LL) 5620
1D Compatibility (HY) -11200 + (ID) 2400
Total energy: -156391.0 ( -72.50 by residue)
QMean score : 0.444
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