Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVL---A-EKGMDYPFNNVREELK--SSDYTFVDLETAITTRTKKVPY-QEFWIKSDPSSLTALKNA--GVDMVNISNNHILDYYEDGLLDTTAALRANNLAYVGAGKNEDEAYQLKVAD-IKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERA--KNKDIDYMVVYFHWGVEKTNTPVDYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQG-KVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
| 3THO Chain:B ((1-262)) | ----------------------------------------------------------MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLIL--------LTGDLLHSRNNPSVVALHDLLDYLKRMMRTAPVVVLPGNQDWKGLKLF-GN----F---V-TSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDE-S------KNEG--DF--RFFLESRLNK-LYEEALKKEDFAIFMGHFTVEGLAG---REIIINRALIPSV-VDYAALGHIHSFREIQK--QPLTIYP-GSLIRIDFGEEAD-EKGAVFVELKRGEPPRYERIDAS--------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3THO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -59647 for 1901 contacts (-31.4/contact) +
2D Compatibility (PS) -24917 + (NN) -4277 + (LL) 8500
1D Compatibility (HY) -3600 + (ID) 1700
Total energy: -85641.0 ( -45.05 by residue)
QMean score : 0.320
|
|
|