Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVEGLLGFLGAALGIGFSLMVLVIPDISQALEEE-----SFFFY--MLTIGSLVLSGVGLAGSFIVS--HKPRLGGAMMVAAAIGCTMSISIMFLLPIVLLAVGGLIALINYEEAASVEE
2CBL Chain:A ((218-305))
-THPGYMAFLT-------------YDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIPHNKPLFQALIDGFREG-------FYLFP------DGRNQNPDLTG------
General information:
TITO was launched using:
RESULT:
Template:
2CBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71763 for 490 contacts (-146.5/contact) +
2D Compatibility (PS) -8322 + (NN) 2287 + (LL) 3992
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -79806.0 ( -162.87 by residue)
QMean score : 0.265
(partial model without unconserved sides chains):
PDB file :
Tito_2CBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CBL-query.scw
PDB file :
Tito_Scwrl_2CBL.pdb
: