Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGQLKGLPVEDGFRMPGEYEPHIGCFMIWPERPDNWRLGGKPAQQNYKEVAVAISNFEPVTMFVSPNQYK--NARKELPDTIRVIEMSNDDAWIRDYGPSFLVDDKGDMRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCELER---IDYYSQKDFILEGCSIHVDGEGTLVTTEECLLSEGRNPNLTKIEIEQTLKKYFHAQKVIWLKHG-FYLDETNGHVDNIFNFVAPGEVVLSWTDNKSDPQYEISRECYDILANKTDAKGRTFIIHKLHCPDPVLITQTESEGVEAINGTFPRQAGDRLAASYVNYYTANGAIIFPLFDDPKDKDAQELLEKLYPDRKIVGIKAREILLGGGNIHCITQHLPDKSTIRE |
| 3HVM Chain:A ((1-330)) | -----------MKRMLAEFEKIQAILMAFPHEFSDWAYCIKEARESFLNIIQTIAKHAKVLVCVHTNDTIGYEML-KNLPGVEIAKVDTNDTWARDFGAISIENH-GVLECLDFGFNGWGLKY-----PSNLDNQVNFKLK-SLGFLKHPLK-TMPYVLEGGSIESDGAGSILTNTQCLLEKNRNPHLNQNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLDKDTIVYSACEDKNDEHYTALKKMQEELKTFKKLDKTPYKLIPLEIPKAIFDE-----------------NQQRLPATYVNFLLCNDALIVPTYNDPKDALILETLKQHTP-LEVIGVDCNTLIKQHGSLHCVTMQLY------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168540 for 2807 contacts (-60.0/contact) +
2D Compatibility (PS) -35400 + (NN) -16419 + (LL) 2016
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -241293.0 ( -85.96 by residue)
QMean score : 0.444
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