Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSILMAIIQITGIFIAIQILTNKVFSIKEGLVTIAIAMLAFPLFTLVQYWSMIFVLIVFVSALYWKNKNVVVSASITLVVIILLTISDSIVGFILVPGLNFKYDEIFNELLPTLIYCAGMLANLLVFSFLLRKLIEKVNISRFVEHRKYAYIIFSIVALTVLAFYMNIYAGSIAGFDGSVLKINTLIFTGYTILLIVIVTVVINTATNELKVQNQKEQLEQLQDYVTTLESLHREMRVFRHDYVNILSTLVGYIDNN------------DMPGLKYYFENNIVP-INKTIESNNYKISLLQNIHV----------------IELKGLLAVKLIRAQELK--------IDAILEVVEPIDKISMDSIDLCKVVGILLDNAVEAALTCE-----NPVIRIAFVKKGDSIIIVFANSLPV-NMPPIYKIFEEGFST------KGEGRGLGLASLREIMKKYSHVALDTKV---TDREVIQELEIM |
2E0A Chain:A ((90-349)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRML-MNQHILIFSDSQTGNPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPNAPLAGFGYGLPISRLYAKYFQG-DLNLYSLSGYGTDAIIYLKA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65290 for 1406 contacts (-46.4/contact) +
2D Compatibility (PS) -20848 + (NN) -2133 + (LL) 24284
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -70987.0 ( -50.49 by residue)
QMean score : 0.312
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