Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYKIVALLMLLCFAFAPGVLAADSDSYLENNGKMDIKTDRLQKTEEEKTKELEQMEETELDKNGIPLFTDEMDEKIAKEKAAEKAEYDRIKDSLFEEESTSGETVKKTKEKLFTGEYETTAVNTETPTTTETTVEDETKKTKQKTVGGAIAGTLVALAGGIYVAARNVFE |
| 2JQ3 Chain:A ((1-79)) | --------------------------SEAEDASLLSFMQGYMKHATKTAKDALSSVQESQVAQQARGWVTDGFSSLKDYWSTVKDKFSEFWDLDPEVRPTSAVAA------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23835 for 333 contacts (71.6/contact) +
2D Compatibility (PS) -8283 + (NN) -2150 + (LL) 7324
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 19226.0 ( 57.74 by residue)
QMean score : 0.411
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