Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPTWKIGIIVAAVPLII--IAVVLWGSFKEARYNLVSLPDDGVVLNNEQETLQFQKGNTLYRSWNSDQLIAKNDKEDTRNEIM-ESTILYLNKEALMFTKSVPVIDTNGVSSKLKGRQVYQQTN-----SSYKYKNSEIVENSIVKLANRQYYLNADATLYLGGKEIKKVTKPLLLIDKTGSVTIYENKKKSRFLGHMTLKVNDKTVLDASNETYTVGERKIDLASFGGTDNEKIVVKEDEKKEDKKKTAESAKKTASNTSQSENESNQTTKGTGNQLNATKKYGNNLNVGNGTSDSEPNDGKDTKNNGSGSNANGGTNQSGLNEIDDYEAVLRKIEDLNKKLERNIPVLR---IGYIAPGVTSVKVSYNYADPNNTLIGVTKISAVDEKTGKTVNT-----QYVSAVDTEA---TLKGLSPNGKYHLEFTYQYDLGTNKGIQEVKMQSDSFTTQTVAAIYQMQSVTSTTMKVNIALDAQIDDVKRARIKVTKSDGDFFYMNVSANFLNGNGEILNATGLKPSTAYQF-QTVIEMKNGETIELNSS---EKYYTMQATVLKNLKASQSVNKVLQVQYDWSSADYTLNQAIIELEDEEDNTEVDYQIVNQEKGNIHLVPDTKSELINLKAKLVLKTTNNNTKESKTFEYPVKQEIEYDKQAKLTMDLTPFQTEENSEAQTEKQDV-VAEKETNGNDLTAKMEDVLAPQNATYDMSFSMQRKAL---ETYQLAFERKIAGIDDDNWTMWKSQQVTTDEAGQVKVTETISKLAKDSFDYRVAVYDAQGALQLYVYQK |
| 3WKX Chain:A ((1-659)) | MNVTITSPFWKRRRDQIVESVIPYQWGVMNDEIDT--TVPDD---------PAGNQLADSKSHAVANLKVAAGELDDEFHGMVFQDSDVYKWLEEAAYALAYHPDPELKALCDRTVDLIARAQQSDGYLDTPYQIKSGVWADRPRFSLIQQSHEMYVMGHYIEAAVAYHQVT------------------------GNEQALEVAKKMADCLDANFGPEEGKIHGAD-GHPEIELALAKLYEETGEKRYLTLSQYLIDVRGQDPQFYAKQLKAMNGDNIFHGFYKPTYFQAAEPVRD---------QQTADGHAVRVGYLCTGVAHVGRLLGD-QGLIDTAKRFWKNIVTRRMYVTGAIGSTHVGESFTYDYDLPNDTMYGETCASVAMSMFAQQMLDLEPKGEYADVLEKELFNGSIAGISLDGKQYY---YVNALETTPDGLDNP--DRHHVLSHRVDWFGCACCPANIARLIASVDRYIYTER-----------------------DGGKTVLS---------HQFIANTAEFASGLTVEQRSNFPWDGHVEYTVS-LPASATDSSVRFGLRI-PGWSRGSYTLTV------------------------------NGKPAVGSLEDGFVYLVVNAGD--------TLEIALELDMSVKFVRANSRVRSDAGQVAVMRGPLVYCAEQVDNPGDLWN---YRLADGVTGADAAVAFQADLLGGVDTVDLPAVREHAD-EDDAPLYVDADEPRAGEPATLRLVP-----------YYSWANREIGEMRVFQRRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 201248 for 5540 contacts (36.3/contact) +
2D Compatibility (PS) -64479 + (NN) 6095 + (LL) 9336
1D Compatibility (HY) -9600 + (ID) 5550
Total energy: 137050.0 ( 24.74 by residue)
QMean score : 0.066
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