Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLFSITSVVLLVLSLVVVSIGAEPKRAKAAENVPQYRNVMYYGDWSIWGGEGNFYPKDIPADQLTHLNFAFLDFNSNGDLVFTDKDAAVGAPVGQEGVQWGG---ANAGVLNAIQDLRAQNPNLKIGVSVGGWSKSGDFSTVAADPTKRANFVKNVMKFVKYTNMDFVDLDWEYPASVRDADLVDNKNDEGTPNAKPADKQNFITLLQDLRTALDKQGVD--INKKYELSVALPAAKSTLENGIDVANLFKVVDFANVMTYDLNGAWTPNSAHHTALYGNPKDPNYDSGFSVDQTVKYLKEKGAVSNKIVVGAAFYTRGWNKVAAGTDTALPGLFQAAEKTNKDADGSLTYGANNENPIKTGDGGRAGGVWAYRSIDALKAKTPTLKEYWDDTAKAPYLYSKETGEFYTYDNTRSIGYKAQYVKDNNLGGMISWMQSQDKTTTSTKRDELTKAIKTGLFGTSAIPQNAITYANLNVVATVKPYSENGVGYEITITNNEKADETNEVLKSTELSFETVKLPKFYIPVKAGETLTAGDYKAGTVTTSGGNTVVDLASVYDAQQIPQGASYTFRLKSSASSVDVANISKIDLTQRMVKSSVEFGKQTIFGGGTVVPDPSDTEAPTVPKALASSNVTDKSATLTWTASTDNKAVAGYKVYRNGTEVGSVSGTTFTDSGLTAKTAYTYTVKAYDAAGNFSAASSALTVTTLDAATPPATPAWDAAKTYNKGDRVSYKGKTYEAQWWTQGNEPGAEQWGPWLLIN |
3G6M Chain:A ((19-386)) | -----------------------------------TGSINAVYFTNWGIY--GRNFQPADLQASKILHVLYSFMNLRVDGTVYSGDTYADLEKHYSD--DSWNDIGTNAYGCVKQLYKLKKANRSLKIMLSIGGWTWSTNFPAAASTEATRATFAKTAVEFMKDWGFDGIDVDWEYPAS-------------------ETDANNMVLLLQRVRQELDSYSATYANGYHFQLSIAAPAGPSHYN-VLKLAQLGSVLDNINLMAYDYAGSWDSVSGHQTNLYPSTSNPS-STPFSTKAAVDAYIAAGVPASKIILGMPIYGRAFVGTDGPG--------------------KPYST--------IGEGSWESGIWDYKVLPK-----AGATVITDSAAGATYSYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASADKTG----SDSLIGTALSSMGSHDS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113041 for 3255 contacts (-34.7/contact) +
2D Compatibility (PS) -38823 + (NN) -21651 + (LL) 20620
1D Compatibility (HY) -22400 + (ID) 5350
Total energy: -180645.0 ( -55.50 by residue)
QMean score : 0.450
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