Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMVEKWRPYR----TEVKGIAVSCPGVVDTEKGVIYQGGSLLFMH-EKNLAEMLARECHVPVVLQNDAKSAALAELWLGV-------------AKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSFDTKKLRGTFFGRTGSAVELIKRIASKKNLPNKKDGEHVFELIN---QGD-EEANAIFDAYIYELASQILNIQYLIDPEIIAIGGGISA-QPVVVERLNDAVAEIKAANPYHAAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR |
| 3MCP Chain:A ((10-325)) | IVMTLDAGGTNFVFSAIQGGKEIADPVVLPACADCLDKCLGNLVEGFKAIQAGLPEAPVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLRNKK---Y-PEYIVEESVSIRAVMRVYAERSGDAGARTPKEIFEIAEGIRPGNREAAIAAFEELGEMAGDALASAITLID-GLIVIGGGLSGASKYILPVLLKEMNAQTGMM-------QKEVYDLDEEKSFAGFARGEAVEVLVP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MCP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151570 for 2182 contacts (-69.5/contact) +
2D Compatibility (PS) -31508 + (NN) -15663 + (LL) 424
1D Compatibility (HY) -14000 + (ID) 2900
Total energy: -215217.0 ( -98.63 by residue)
QMean score : 0.401
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