Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MQVLVLPENKDINYIKTVQEVKRFFA---------DFERFRMITGLS----------KKPHLLRNGFLEEPQFEPVAFSARHNKE--VILEARWLVEKYTEMLNQM-DDLYRTILMECYVERKQDVAVMMDLPY--------------EIAQFKRIKKRAVLELATLMGILVRK-------------------- 1NKS Chain:A ((1-194)) MKIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSVEKQKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLLEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVLAGSTVKVIVNVEGDPSIAANEIIRSMK

General information: TITO was launched using: RESULT: Template: 1NKS.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -56594 for 962 contacts (-58.8/contact) + 2D Compatibility (PS) -14959 + (NN) -2618 + (LL) 0 1D Compatibility (HY) -6000 + (ID) 1050 Total energy: -81221.0 ( -84.43 by residue) QMean score : 0.260

(partial model without unconserved sides chains): PDB file : Tito_1NKS.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1NKS-query.scw PDB file : Tito_Scwrl_1NKS.pdb: