Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MLKIVGVRFKDVGKIYYFSPGELEITENQGVIVENAQ-GIEFGKTVIEPRYVDEE-DVVLPL------KKVLRIATEADYKCVAENGDSCQKAFLLCDEKIRE---RELEMSLVDVDYTFDRNKIIFYF-T-----AEG-RVDFRELVKDLASVFRTRIE----------LRQIGVRDEAKLLG------------------GIGPCGRMLCC-STFLGDFEPV-------------------------SIKMAKD-QN-LSLNPTKISGLCGRLMCCLKYE-NDEYEQAKREMPDVGVKVKTPEGAEARVSGINLLS-RILQVSLPEEETVIE--YELDELRPYNEFLKQPAKS------ |
| 3N0W Chain:A ((6-378)) | QVTLGVLTDMSSVYADSAGKGSVAAVQLAIEDVGGKALGQPVKLVSADYQMKTDVALSIAREWFDRDGVDAIFDVVNSGTALAINNLVKDKKKLAFITAAAADQIGGTECNGYGIGFLYNFTSIVKTVVQAQLAKGYKTWFLMLPDAAYGDLMNAAIRRELTAGGGQIVGSVRFPFETQDFSSYLLQAKASGAQLIVSTSGGAANINIMKQAREFGLPSKTQKVGGMIDILTDVKSAGLRVMQGQEYATSFYWNMDDRTRAFAKRFYAKMGKMPTNNQAGGYSAALQYLKAVNAIGSKDPQKVFAYLKTIKFDDAVTRHGTLRPGGRLVRDMYLVRAKKPEDQKGDWDYYDVVATIGPEQAFGPLSESRCAMDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21735 for 2111 contacts (-10.3/contact) +
2D Compatibility (PS) -28745 + (NN) -5136 + (LL) 0
1D Compatibility (HY) 5200 + (ID) 1000
Total energy: -51416.0 ( -24.36 by residue)
QMean score : 0.152
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