Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MNIVIALIPAVMWGIMPLVVSKIGGKPRQQIIGTTFGALAFAIGVFIFTNPEYTATIIIASFVSGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQHKDENSGQNMKKGIITLLISSVGYVGYVVITRWFDISGWDAILPQAIGMVVAGLLFSIKSEEKRFTKQTWLNMIPGVMWATGNLALLFSNKLVGIATGFSLSQMGVVISTIGGILFLGEKKTKKELILVIIGVVLVIIGGTMIGIAKS |
| 1A8R Chain:A ((1-221)) | PSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHMTEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEM------------------------------VTVRDITLTSTCESH-------------FVTIDGKATVAYIPKDSVIGLSKINRIVQFFA---------QRPQVQERLTQQI-LIALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGG-LFKSSQNTRHEFLRAVR--------------HHN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148649 for 1623 contacts (-91.6/contact) +
2D Compatibility (PS) -22614 + (NN) -483 + (LL) 5024
1D Compatibility (HY) 800 + (ID) 1300
Total energy: -167222.0 ( -103.03 by residue)
QMean score : 0.191
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