Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNISDIIEAYLKQVLESSEAVEIKRSEIADKFECVPSQINYVINTRFTMERGYIVESKRGGGGYIRIIKVKMNDKLQLLEAIISMVHDKKVSQSFSEDVILRLLEEEVITKKEARLMVAALDREVLILPLPDRDILRSRILEAMLVALKYD
3RKX Chain:A ((19-71))
----------------------YISGQSIAESLNISRTAVKKVID-QL-KLEGCKIDSVNH-KGH---------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10629 for 213 contacts (-49.9/contact) +
2D Compatibility (PS) -4024 + (NN) 1920 + (LL) 11672
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -3461.0 ( -16.25 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_3RKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RKX-query.scw
PDB file :
Tito_Scwrl_3RKX.pdb
: