Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVKEYKQLNGLALAYMGDAVYEKFIREYLLA-AGKTKPNQLHKTATKFVSAKGQAVALKAMI--AEGFLTEEEDRIAKRGRNAKSYTVPKNTDPGTYSMSTSFEAVLGYLYLAGEMERLQEWMEKALEIVEKGVETN
2QVW Chain:A ((645-752))
---------HVYQKLELLGDAFLKCSLALHLHALHPTLTEGALTRMRQSAETNSVLGRLTKRFPSVVSE--------VIIESHPKI----QP----DSKVYGDTFEAILAAILLACGEEAAGAFVREHVLPQV------
General information:
TITO was launched using:
RESULT:
Template:
2QVW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29684 for 730 contacts (-40.7/contact) +
2D Compatibility (PS) -11149 + (NN) -4423 + (LL) 2012
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -45594.0 ( -62.46 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_2QVW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QVW-query.scw
PDB file :
Tito_Scwrl_2QVW.pdb
: