Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQILLVDGYNVIGAWPELSYLKDRDLEAARDKLVEWMAEYQSYTGYR-VVVVFDAQFVRGV-------KR---KS-KKYQVEVVFTHED-ETADEYIEQKAIEWKNVRTQIMVATSDYTEQWAIFGQGALRISSRELLFEIQEMSKQIGKKIKRIQEEMPKSNLNLDSDVISQLEKWRRGEE
3V32 Chain:B ((135-247))
-LRPVVIDGSNVAMSHGNKEVF------SCR-GILLAVNWF-LERGHTDITVFVPSWRKEQPRPDVPITDQHILRELEKKKI-LVFTPSRRCYDDRFIVKLAYE-----SDGIVVSNDTYR--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3V32.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57815 for 671 contacts (-86.2/contact) +
2D Compatibility (PS) -10175 + (NN) -4976 + (LL) 6164
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -70852.0 ( -105.59 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_3V32.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V32-query.scw
PDB file :
Tito_Scwrl_3V32.pdb
: