Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNTLKTSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLESDIYGNGAVIEDFETKIAKIL----GK----QSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTA----NQLLTIDDIKSL-R-EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKS-AEEIC---ALFDSVYVSFYKGIG-GI--AGAILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADY-YFEK---RIGKM-AEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL |
| 3L8A Chain:A ((75-417)) | ----------------------PVPEIKEAIINY-GREHIFGY--NYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSE-KG-DAVLINSPVYYPFAR---TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNP-GGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQ--HEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVM-EPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATP-----KNTVQEALSRIIS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139211 for 2688 contacts (-51.8/contact) +
2D Compatibility (PS) -33964 + (NN) -14165 + (LL) 832
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -195458.0 ( -72.72 by residue)
QMean score : 0.448
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