Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNTPEALIDLFEELKNLFETDTSLNNQNSSRLQEILTTATIRVRKASQTVELEARSVFQNIHTLCFVEKIHLNPEEANVLKEIEKIALSKGFWGGMNTLNVTNQFPSN
2IP6 Chain:A ((7-93))
--EHIKQQALDLFTRLQFLLQKHDT--IEPYQYVLDILETGISKTKHNQQTPERQARVVYNKIASQALVDKLHFTAEENKVLAAINELAHS-------------------
General information:
TITO was launched using:
RESULT:
Template:
2IP6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43442 for 620 contacts (-70.1/contact) +
2D Compatibility (PS) -9493 + (NN) -5991 + (LL) 648
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -64328.0 ( -103.75 by residue)
QMean score : 0.705
(partial model without unconserved sides chains):
PDB file :
Tito_2IP6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IP6-query.scw
PDB file :
Tito_Scwrl_2IP6.pdb
: