Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIVLVSHSQKITEGLQEMIVEMV-GDTVHIISSGGTGDGRLGTNAIMIADNIATCTNSEHIYIFCDI-GSAILSAETALELLDTDLLEKTTIIDAPLVEGAFTAAVQSLVNPSKEAILQELTNVH
3IPR Chain:A ((1-79))
MLGIVIATHG-ALSDGAKDAATVIMGATE-NIETVNLNSGDDVQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLV----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IPR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57664 for 547 contacts (-105.4/contact) +
2D Compatibility (PS) -8441 + (NN) -2804 + (LL) 4248
1D Compatibility (HY) -4800 + (ID) 450
Total energy: -69911.0 ( -127.81 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_3IPR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IPR-query.scw
PDB file :
Tito_Scwrl_3IPR.pdb
: