Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIKKYEPLNLYTNFKKSAERYPEMPIHFDEELVTFPELGLHSTYKKCEEAIIQKAAHLHKFGVRKEEKVIVYKSAKFDSYILAVAISYIGAVPIMVSPHLPASTIDIFVNRLDQPWLLFDSETSDKSHQLNNLPDS----R-LINAEQLFKA-PLDGYTCEQEELPKDMIAYMTHTSGTTGVPKLIAHSANSMGWRTKYQRRILNFIKPRGLVAFHISPVHSRFNIGVSSLMSLGFPLLPIANPSKANVEKVLREYKPYVLETHPNHFVQWASLAREKPDVFQSIKFYHSTFDAINKETMAVFLRTSEYKKPLFLQIYGQSECGPMILRGHTLQSIETLNARDMGIGVPGLTEVRIVDQDGNPVPAGVSGNIQMLSKGRALTYYKEEARFEENVYGPWWDSGDYGMKDEKGRLFLQDRQVDLVETIDS---TLAIEDKLLDTLTFLDEVVIIRGENG--SPQPII-AVHNDGEMNWDAWWKAV-SDLPHMNEP-MVMKYDEIPRTATMKVQRLQMERELKK |
| 3R44 Chain:A ((16-512)) | --------KNIGWMLRQRATVSPRLQAYVEP------STDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIGADSLAERLRSAAADEPAVECGGDDNLFIMYTS---GHPKGVVHTHESVHSAASSWASTI-DVRYRDRLLLPLPMFHVAALTTVIFSAMRGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPDFRYFITGGAPMPEALIKIYAA----KNIEVVQGYALTESCGGGTLLLSED-AL-RKAGSAGRATM-FTDVAVRGDDGVIRE-HGEGEVVIKSDILLKEYWNRPEATRDAFDNGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIG-VPGVSEVAVIGLPDEKWGEIAAAIVVADQNEVSEQQIVEYCGTRLARYKLPKKVIFAEAIPRNPTGKILKTVLREQYS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R44.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233651 for 4182 contacts (-55.9/contact) +
2D Compatibility (PS) -51789 + (NN) -26134 + (LL) 1348
1D Compatibility (HY) -14400 + (ID) 3750
Total energy: -328376.0 ( -78.52 by residue)
QMean score : 0.472
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