Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRK--NDFIYVTGGNTFFL-----LQELKRTGADKLILEEIAAGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPHYNNTPFKEITQKIVTEYAGKSQIYPISNHEAIFIRGKEVITKRLS----------------------------------------------------------------------- |
| 4XGC Chain:A ((38-388)) | PCREREFENIYAFLEGKIQDQCMYVSGVPGTGKTATVTGVIRTLQEYLEINGMRLTEPRQAYVQIYKQLTGKTVSWEQAHALLEKRT------------TVLLVDELDILCNRRQDVVYNLLDWPTKLVVVTIANTMDLPERLGLTRLTFQPYSHKQLQEIVTARLGKGEAVQLVAR----KVAAVSGDARRALDICR-RATEIADTAAVKCVTMLHVQQALAEMIAS-AKVQAIRNCSRMEQIFLQAIAAEVTRTGVEETTFMGVYQQVETIAAFMGVTFPPPGRALRLCSKLGAERLIISEHSRNDLFQKILLNVSADDIHYALRV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71049 for 1202 contacts (-59.1/contact) +
2D Compatibility (PS) -19329 + (NN) 816 + (LL) 1156
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -96356.0 ( -80.16 by residue)
QMean score : 0.294
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