Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSKEKGA--DLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAP-----GNRQVEHENVINAAKKAGVSYIAYTSFAGAD-KS----TSALAEDHFFTEKVIEKSGIAHTFLRNNWYFENEM-PMIGGALSAGK--FVYAA-ENGKVGWALKREYAEVAAKAVAG--AGFPEILELSGPLMTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDALRELLK |
| 2WM3 Chain:A ((6-294)) | KLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLG----FPG--ARDLANMFRFYALRP-D-RDIELTLRLNPKALTLDQWLEQHK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103419 for 2245 contacts (-46.1/contact) +
2D Compatibility (PS) -29907 + (NN) -15980 + (LL) 640
1D Compatibility (HY) -4800 + (ID) 2450
Total energy: -155916.0 ( -69.45 by residue)
QMean score : 0.518
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