Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MVVADYLALFAVICIWGL-LLINIVLIVAGYVYYLKNEARKVPEIPVEVPFVSVMVPAHNE-GKVIVKTVESLLAFDYPVDRYEIIVINDNSSDNSAELLAAIQAKNPTRFLKIINTDNITGGKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGEITNDAKLGAVIGKFRTRNRNASWLTRFINIETLSFQWMAQAGRWAL------------FKLCTIPGTNFIVRRSLLEEIGGWDVKAVA---EDTEISFRIYMMGYRI------------------KFQAKAVTWEQEPQTLPVWF-KQRSRWAKGNIYVILKNVPLLFKREGRRVRF---DILYFLSIYFLLLTS---------LIVSDVL-----LVLYALGLVHTTLAGLSGALWLLAILLFVAGTFITLTTEKGEISFSNLLFIM-----------LMYVTYC------QLWMVVAAYGFF----------------IFLKDTVLKRETKWYKTERF----------- |
| 2D7I Chain:A ((35-570)) | GQKLKDWHDKEAIRRDAQRVGNGEQGRPYPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKR----EGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFT-WREDIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSLTQQWLFEHTNSTVLEKFNRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D7I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221075 for 3067 contacts (-72.1/contact) +
2D Compatibility (PS) -42597 + (NN) 6814 + (LL) -36
1D Compatibility (HY) -1200 + (ID) 3350
Total energy: -261444.0 ( -85.24 by residue)
QMean score : 0.219
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