Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKWEEKRDMVKIATWYYHYGWTQAQIAKKIGISRSIISKTLQRAKDLGIVEIFIKDETYYTVDLEQKLEEKFGLEEAIVVATHDMSEEEALNFLAKEAAYTLSKRIAKVKTLGISWGK-TIRKFANEFPFIPHKDLTIIPLIGGMGSSDIDLHSNQICYDLKKKMKCHSKYLYAPALVEDTEMKTDLSKNKYISEVLEEGKTVDMAIVGVS--SPYNHSTMEEIGYINSEDIEELRYKDVVGDINSRFFTADGKEAKTEINTH--VIGLSLEELKNIPTVVALANGLQKKEALVAALNAGLIDVIVITDRMAEYILQKND |
4L4Z Chain:A ((18-266)) | ----------------------------------------------------------EGCLEYETQLRRQFSLQHVRVIP--GLADADVGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIG--------QLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKG-DVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125238 for 2113 contacts (-59.3/contact) +
2D Compatibility (PS) -26617 + (NN) -9410 + (LL) 5920
1D Compatibility (HY) -14000 + (ID) 3500
Total energy: -172845.0 ( -81.80 by residue)
QMean score : 0.539
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