Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LANIEYEIIEEIGVLSENARGWRKELNKVSWNGRPPKYDIRDWSEDHEKMGKGITLTDEEAEVLKKLLD
2ZRR Chain:A ((73-88))
---------------------------------------------------DGVSLNENQSKKLKEL--
General information:
TITO was launched using:
RESULT:
Template:
2ZRR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1334 for 57 contacts (-23.4/contact) +
2D Compatibility (PS) -1929 + (NN) -1538 + (LL) 3112
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -3139.0 ( -55.07 by residue)
QMean score : 0.878
(partial model without unconserved sides chains):
PDB file :
Tito_2ZRR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZRR-query.scw
PDB file :
Tito_Scwrl_2ZRR.pdb
: