Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAFDLEDFLTTAITDYAKEKVEAGTWDEEESLAKSQDSFNKLLYDGITTPNEYLYSII-S-GEKIGYIWFHVDETRSGKHAFIYDFVIFEAFRGKGFGTKTLAALDVLAKEMQITKIGLHVFAHNQTAIGLYNKVGFQNTDITMAKYL
1UFH Chain:A ((9-156))
-QTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDVVMSKKL
General information:
TITO was launched using:
RESULT:
Template:
1UFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76230 for 928 contacts (-82.1/contact) +
2D Compatibility (PS) -15464 + (NN) -3665 + (LL) 208
1D Compatibility (HY) -10800 + (ID) 3200
Total energy: -109151.0 ( -117.62 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_1UFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UFH-query.scw
PDB file :
Tito_Scwrl_1UFH.pdb
: