Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHENLRELEDQLIELRQTYQEVISETREFEDPQLQNGPINAAEVRLSALRHEIAEVEKKIKKAESKTE
4G1A Chain:A ((2-27))
---------------------------------------IAALEQKIAALEQKCAACEQKIAALE----
General information:
TITO was launched using:
RESULT:
Template:
4G1A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1732 for 96 contacts (18.0/contact) +
2D Compatibility (PS) -2807 + (NN) -2764 + (LL) 3336
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -3003.0 ( -31.28 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_4G1A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G1A-query.scw
PDB file :
Tito_Scwrl_4G1A.pdb
: