Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKSEIRKLLQEIKKQVDNPGNSSTTEIKKMASEAGIDEQTAEEIYHLLTEFYQAVEEHGGIEKYMHSNISWLKIELELLSACYQIAILEDMKVLDISEMLSLNDLRIFPKTPSQLQNTYYKLKKELIQVEDIPKNKPGRKRKTQKNTKKEKTNIFGKVVPAEFKAPASIKEQISYDKSREKNLVDLLSGVKSNVQLLSENQGEENNVYDLLKSIYSLSSLAVQKEELDKKYQDLQTKCQELEQENSYLKQQNETMTDSFHTLVLQVADFAYASDLDQIQALPLFSQ--------QLVVTLNQLGVFKENYKQM |
1D5Y Chain:A ((1-292)) | -QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYR--------------FDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRP----PLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDK----DDEQEVFYTTALAQDQADGYVLTGHPVMLQ---GGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDDRPINLRCELLIPIRRKLAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 75044 for 2131 contacts (35.2/contact) +
2D Compatibility (PS) -28965 + (NN) 3982 + (LL) 3020
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: 47931.0 ( 22.49 by residue)
QMean score : 0.178
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