Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTERALQVTNLHKKIRKRE---IIKGISFEVMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGTILIGGKDIRKNFTEAMRG-LGSIVENPEFYTFLTGQENLAYFARMDSSIKKERIQEVTELV-----------GLEKRINDRVSTYSLGMRQRLGIAQALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAIMTDGTIIKTDQVAHLLSSRAQLRWRVTPIEQAKAFLESVTEVEVDGEYLVTAMNEESAEWNEQLVAKGIKVHEIDKRKPSLEDLFLELTGGQSID |
| 4AYW Chain:A ((372-598)) | ----ALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFS-CSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDE----LDAENEYLVQEALDRLM--DGRTVLVIAHHLSTIK-NANMVAVLDQGKITEYGKHEE--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131309 for 1558 contacts (-84.3/contact) +
2D Compatibility (PS) -22227 + (NN) 1084 + (LL) 7212
1D Compatibility (HY) -15200 + (ID) 3600
Total energy: -164040.0 ( -105.29 by residue)
QMean score : 0.589
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