Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEELEVIHKGLANAKNGFKAVPGKLYLTA---TYIVHKPNDY-FDEEINIPLNRVAKIRGVRTKILGKELLSNILEIDMISGVKYQFVV---NKQKKWLEAVSEVLESRGESEKLG
2COC Chain:A ((27-109))
------------------------WAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEE---RLDSGHVWKLQWA-KQSWYLSASSAELQQQWLETLSTAAHSGP------
General information:
TITO was launched using:
RESULT:
Template:
2COC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34285 for 424 contacts (-80.9/contact) +
2D Compatibility (PS) -8263 + (NN) -1628 + (LL) 1976
1D Compatibility (HY) 400 + (ID) 450
Total energy: -42250.0 ( -99.65 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_2COC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2COC-query.scw
PDB file :
Tito_Scwrl_2COC.pdb
: