Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLITTENKLAGSKKALEIIEKGITSGEVNTLGLATGSTPETLYAELVK----SDVDTKNVTTTNLDEYVGLAASDPNSYHYYMNDLLFSKKAFKESF--LPNGEATDAEAECARYEE-ILSEHPIDIQVLGIGTNGHIGFNEPGTSFDSITHKVVLTDSTREANKRFFERE-EDVPTHAYSMGIKSIMNAKKIILLAFGENKAQAIKETIKGPVDVNCPASVLQNHPDVTVILDNEAASLL
1FQO Chain:B ((36-240))
------------------------------VLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCD-------
General information:
TITO was launched using:
RESULT:
Template:
1FQO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67903 for 1569 contacts (-43.3/contact) +
2D Compatibility (PS) -21900 + (NN) -16111 + (LL) 2884
1D Compatibility (HY) -16000 + (ID) 4000
Total energy: -123030.0 ( -78.41 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_1FQO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FQO-query.scw
PDB file :
Tito_Scwrl_1FQO.pdb
: