Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------LVIYLLAGFFLLLFIVLSFIDRRRISNGI----------ILTMALFFSVLSVVYATFSKGNELL-------VSVMGTVLLLLVLLIPFFV---VGIATMLIVNGRLMLKREGRKLANMLPLI-----IGLGILA----------------LIITWFGSILKTGSPILGIVVVFIV-----ALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEQGI---DENFIIME----------DQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIRE----FIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR---- |
| 4QLA Chain:A ((19-442)) | LDLEEWWGPPELKQKQDTSIKPFEITFSETMVKELKERIKKRRPFAPPLEGVGFKYGFNSKQLDSWLKYWAEEYP-FAERQKFLNQYPHFKTNIQG--LNIHFMRITPKVPKGVEIVPLLLLHGWPGSVREFYEAIPHLTAVSKDRNFALEIIAPSLPGYGFSDAAVRPGLAAAEVAVIFKNLMARLGYKQYYVQGGDWGALIGSAMATFFPKEIIGFHSNMALTLSPAATFLEFVGALFPSLIVEPELANRLYPLSEKYSTLLEELGYMHIQATKPDTVGIGLTDSPAGLLAYILEKFSTWTNPDLRSKEDGGLSYRWTKDQLIDNLMLYWSTK-SIVTSMRLYAESFSSRHFDL---KLDEIQVQVPTWVLQAKHELAYQPPCILKMKYPKLVNASVIEDGGHFLAFELPEIFAKDVLKAIGEFRKLKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -283604 for 2528 contacts (-112.2/contact) +
2D Compatibility (PS) -34832 + (NN) 4031 + (LL) 816
1D Compatibility (HY) -8400 + (ID) 3100
Total energy: -325089.0 ( -128.60 by residue)
QMean score : 0.202
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