Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQKTFIKVTCSILTISDT--RNLDTDTSGQLIQSALETA---GHEVISRVVVPDDVTLIKQKINELAANGSFCLI-TNGGTGIARRDVTYEALFATIQQEIPGFGEIFRMLSYEEVGSRAMVSRAFAGFSESGLLLFALPGSSNACQLAVQKLIIPELPHLIAERQK
1JLJ Chain:B ((14-166))
-------QIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSL-NVTPLGMLSRPVCGI-RGKTLIINLPGSKKGSQECFQ-FILPALPHAI-----
General information:
TITO was launched using:
RESULT:
Template:
1JLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112865 for 1209 contacts (-93.4/contact) +
2D Compatibility (PS) -15767 + (NN) -5474 + (LL) 1556
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -145250.0 ( -120.14 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_1JLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JLJ-query.scw
PDB file :
Tito_Scwrl_1JLJ.pdb
: